BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F05LP1|AL425730
(775 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig590 1534 0.0
>3x_Contig590
Length = 2287
Score = 1534 bits (773), Expect = 0.0
Identities = 774/775 (99%)
Strand = Plus / Plus
Query: 1 aaacaggacatctacaagcaagaaagagatggaaattaaggagagcctcgctgcgattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aaacaggacatctacaagcaagaaagagatggaaattaaggagagcctcgctgcgattga 485
Query: 61 tatggaagaattcgaaaactcctatcgtcatttatacacggttgtcaactttcactggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tatggaagaattcgaaaactcctatcgtcatttatacacggttgtcaactttcactggtc 545
Query: 121 tgtctttgggtgccactacttggaatatatgggcgataaagttgagaaagtatgagttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgtctttgggtgccactacttggaatatatgggcgataaagttgagaaagtatgagttct 605
Query: 181 caatcaaatcggcaaaaaaagtcaaacttcaattcttccctttctaactttcaaattcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 caatcaaatcggcaaaaaaagtcaaacttcaattcttccctttctaactttcaaattcgg 665
Query: 241 ttcatttctttctttgtaacataagaggcatactcacttataagcctttattgaagctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ttcatttctttctttgtaacataagaggcatactcacttataagcctttattgaagctat 725
Query: 301 tggttttcagactccactcacaaccgttgtgtttatccaatttttttttctacaaacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tggttttcagactccactcacaaccgttgtgtttatccaatttttttttctacaaacaat 785
Query: 361 ataaacgttctttagcatttagcattcataatgattaacattgataccatgttctatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ataaacgttctttagcatttagcattcataatgattaacattgataccatgttctatcaa 845
Query: 421 atacattcatccacgaacaagtagtagtatctcccggataaacacgcgtctttcaaatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 atacattcatccacgaacaagtagtagtatctcccggataaacacgcgtctttcaaatct 905
Query: 481 ttactcaaatgacatcatttgtttcagttatcttgtgcattccacatttacaaacggctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 ttactcaaatgacatcatttgtttcagttatcttgtgcattccacatttacaaacggctg 965
Query: 541 tsatgaaaacgttgaaaaaaaaaacaaaacagaaacaaacaaataatcatagagaggcat 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 tcatgaaaacgttgaaaaaaaaaacaaaacagaaacaaacaaataatcatagagaggcat 1025
Query: 601 caagaaaggaataaatctaggttttagctctaactaactaggaaagttcttcctttagtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 caagaaaggaataaatctaggttttagctctaactaactaggaaagttcttcctttagtg 1085
Query: 661 tcccataacgtgtcaattgatggataaacattagagtcggtgatttagcggaagttagac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 tcccataacgtgtcaattgatggataaacattagagtcggtgatttagcggaagttagac 1145
Query: 721 caagaaaagacgatgagcattgaacatttttccccgttggatggtcttcagaagc 775
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 caagaaaagacgatgagcattgaacatttttccccgttggatggtcttcagaagc 1200
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9181
Number of Sequences: 1807
Number of extensions: 9181
Number of successful extensions: 101
Number of sequences better than 1.0e-20: 1
length of query: 775
length of database: 10,358,551
effective HSP length: 16
effective length of query: 759
effective length of database: 10,329,639
effective search space: 7840196001
effective search space used: 7840196001
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)